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ns1:pmcid "PMC0" ; bibo:doi "10.1186%2F1471-2407-13-349" . @prefix ns4: . ns4:contains _:b23898337 , _:b23898313 , _:b23898317 . _:b23898313 rdf:type ns4:Section . @prefix dc: . _:b23898313 dc:title "methods" ; ns4:contains _:b23898314 , _:b23898315 , _:b23898316 . _:b23898314 rdf:type ns1:Context ; rdf:value "TMA was constructed as the method described previously [>>20<<]. In brief, formalin-fixed, paraffin-embedded tissue blocks and the corresponding hematoxylin and eosin (H&E)-stained slides were over laid for TMA sampling." ; ns1:mentions . _:b23898315 rdf:type ns1:Context ; rdf:value "We graded the YAP 1 expression according to the distribution, intensity, and percentage of positive cells as described previously [>>14<<,21]. Absence of reactivity was graded as negative. With regard to cytoplasmic distribution, weak cytoplasmic reactivity was considered as low expression regardless of extent. Strong cytoplasmic reactivity with less than 50% positive cells" ; ns1:mentions . _:b23898316 rdf:type ns1:Context ; rdf:value "We graded the YAP 1 expression according to the distribution, intensity, and percentage of positive cells as described previously [14,>>21<<]. Absence of reactivity was graded as negative. With regard to cytoplasmic distribution, weak cytoplasmic reactivity was considered as low expression regardless of extent. Strong cytoplasmic reactivity with less than 50% positive cells" ; ns1:mentions . _:b23898317 rdf:type ns4:Section ; dc:title "discussion" ; ns4:contains _:b23898320 , _:b23898321 , _:b23898322 , _:b23898323 , _:b23898324 , _:b23898325 , _:b23898326 , _:b23898327 , _:b23898328 , _:b23898329 , _:b23898330 , _:b23898331 , _:b23898332 , _:b23898333 , _:b23898334 , _:b23898335 , _:b23898318 , _:b23898319 , _:b23898336 . _:b23898318 rdf:type ns1:Context ; rdf:value "Clinically, pTNM stage and tumor histopathological grade are the best-established predictive factors for important aspects affecting the prognosis of patients with UCB [>>22<<]. These two parameters, however, based on specific clinicopathologic features and extent of disease, may have reached their limits in providing critical information influencing patient prognosis and treatment strategies." ; ns1:mentions . _:b23898319 rdf:type ns1:Context ; rdf:value "Furthermore, the outcome of patients with the same stage and/or pathological grade of UCB is substantially different and such large discrepancy has not been explored [>>23<<,24]. Thus, there is an urgent need for new objective strategies that can effectively distinguish between patients with favorable and unfavorable prognosis." ; ns1:mentions . _:b23898320 rdf:type ns1:Context ; rdf:value "Furthermore, the outcome of patients with the same stage and/or pathological grade of UCB is substantially different and such large discrepancy has not been explored [23,>>24<<]. Thus, there is an urgent need for new objective strategies that can effectively distinguish between patients with favorable and unfavorable prognosis." ; ns1:mentions . _:b23898321 rdf:type ns1:Context ; rdf:value "the Hippo signaling pathway, and is highly conserved along with other components of this pathway; it is involved in regulating the balance between cell proliferation and apoptosis to maintain the steady-state of the cellular environment [>>5<<,6,16]. Overexpression of YAP 1 has been implicated in tumor progression in various human cancers, such as liver, colon, ovarian and lung cancers [12,14,15,25]." ; ns1:mentions . _:b23898322 rdf:type ns1:Context ; rdf:value "Hippo signaling pathway, and is highly conserved along with other components of this pathway; it is involved in regulating the balance between cell proliferation and apoptosis to maintain the steady-state of the cellular environment [5,>>6<<,16]. Overexpression of YAP 1 has been implicated in tumor progression in various human cancers, such as liver, colon, ovarian and lung cancers [12,14,15,25]." ; ns1:mentions . _:b23898323 rdf:type ns1:Context ; rdf:value "signaling pathway, and is highly conserved along with other components of this pathway; it is involved in regulating the balance between cell proliferation and apoptosis to maintain the steady-state of the cellular environment [5,6,>>16<<]. Overexpression of YAP 1 has been implicated in tumor progression in various human cancers, such as liver, colon, ovarian and lung cancers [12,14,15,25]." ; ns1:mentions . _:b23898324 rdf:type ns1:Context ; rdf:value "Overexpression of YAP 1 has been implicated in tumor progression in various human cancers, such as liver, colon, ovarian and lung cancers [>>12<<,14,15,25]." ; ns1:mentions . _:b23898325 rdf:type ns1:Context ; rdf:value "Overexpression of YAP 1 has been implicated in tumor progression in various human cancers, such as liver, colon, ovarian and lung cancers [12,>>14<<,15,25]. These findings suggest a potential oncogenic role of YAP1 in multiple human cancers. To date, however, the expression status of YAP 1 in UCBs and its correlation with the clinicopathological factors of this tumor has not been" ; ns1:mentions . _:b23898326 rdf:type ns1:Context ; rdf:value "Overexpression of YAP 1 has been implicated in tumor progression in various human cancers, such as liver, colon, ovarian and lung cancers [12,14,>>15<<,25]. These findings suggest a potential oncogenic role of YAP1 in multiple human cancers. To date, however, the expression status of YAP 1 in UCBs and its correlation with the clinicopathological factors of this tumor has not been" ; ns1:mentions . _:b23898327 rdf:type ns1:Context ; rdf:value "Overexpression of YAP 1 has been implicated in tumor progression in various human cancers, such as liver, colon, ovarian and lung cancers [12,14,15,>>25<<]. These findings suggest a potential oncogenic role of YAP1 in multiple human cancers. To date, however, the expression status of YAP 1 in UCBs and its correlation with the clinicopathological factors of this tumor has not been elucidated." ; ns1:mentions . _:b23898328 rdf:type ns1:Context ; rdf:value "In previous studies, YAP 1 expression was found to be elevated and correlate closely with aggressive features, and/or poor prognosis in many human cancers [>>14<<-16,21,26-30]. A clinical study involving 177 hepatocellular carcinoma patients showed that YAP 1 could serve as an independent predictor for hepatocellular carcinoma-specific, disease-free survival and overall survival [15]." ; ns1:mentions , , . _:b23898329 rdf:type ns1:Context ; rdf:value "In previous studies, YAP 1 expression was found to be elevated and correlate closely with aggressive features, and/or poor prognosis in many human cancers [14-16,>>21<<,26-30]. A clinical study involving 177 hepatocellular carcinoma patients showed that YAP 1 could serve as an independent predictor for hepatocellular carcinoma-specific, disease-free survival and overall survival [15]." ; ns1:mentions . _:b23898330 rdf:type ns1:Context ; rdf:value "In previous studies, YAP 1 expression was found to be elevated and correlate closely with aggressive features, and/or poor prognosis in many human cancers [14-16,21,>>26<<-30]. A clinical study involving 177 hepatocellular carcinoma patients showed that YAP 1 could serve as an independent predictor for hepatocellular carcinoma-specific, disease-free survival and overall survival [15]." ; ns1:mentions , , , , . _:b23898331 rdf:type ns1:Context ; rdf:value "A clinical study involving 177 hepatocellular carcinoma patients showed that YAP 1 could serve as an independent predictor for hepatocellular carcinoma-specific, disease-free survival and overall survival [>>15<<]. In 92 cases of non-small-cell lung carcinoma, positive expression YAP 1 was observed in 66.3% of the cases, and it was significantly correlated with lymph node metastasis and later clinical stages, and it was a poor prognostic predictor" ; ns1:mentions . _:b23898332 rdf:type ns1:Context ; rdf:value "lung carcinoma, positive expression YAP 1 was observed in 66.3% of the cases, and it was significantly correlated with lymph node metastasis and later clinical stages, and it was a poor prognostic predictor of the patients [>>21<<]. In our study, further correlation analysis revealed that positive expression of YAP 1 was correlated closely with tumors poorer differentiation, higher pT and/or pN stages." ; ns1:mentions . _:b23898333 rdf:type ns1:Context ; rdf:value "Overexpression of YAP 1 in the liver of transgenic mice could expand the liver mass from 5% of bodyweight to 25% and eventually lead to tumor growth [>>17<<]. Moreover, YAP 1 overexpression stimulates proliferation and increases the saturation cell density in monolayer cultures of NIH-3T3 cells [16]. Furthermore, overexpression of YAP 1 in NSCLC cell lines resulted in a marked increase in the" ; ns1:mentions . _:b23898334 rdf:type ns1:Context ; rdf:value "Moreover, YAP 1 overexpression stimulates proliferation and increases the saturation cell density in monolayer cultures of NIH-3T3 cells [>>16<<]. Furthermore, overexpression of YAP 1 in NSCLC cell lines resulted in a marked increase in the cell growth rate, and overcame cell contact inhibition [21]. It is confirmed that YAP 1 overexpression in MCF10A cells triggered" ; ns1:mentions . _:b23898335 rdf:type ns1:Context ; rdf:value "Furthermore, overexpression of YAP 1 in NSCLC cell lines resulted in a marked increase in the cell growth rate, and overcame cell contact inhibition [>>21<<]. It is confirmed that YAP 1 overexpression in MCF10A cells triggered epithelial\u2013mesenchymal transition (EMT) [12], which is often associated with cancer cell invasion and metastasis. Although we observed a positive association between" ; ns1:mentions . _:b23898336 rdf:type ns1:Context ; rdf:value "It is confirmed that YAP 1 overexpression in MCF10A cells triggered epithelial\u2013mesenchymal transition (EMT) [>>12<<], which is often associated with cancer cell invasion and metastasis." ; ns1:mentions . _:b23898337 rdf:type ns4:Section ; dc:title "background" ; ns4:contains _:b23898338 , _:b23898339 , _:b23898340 , _:b23898341 , _:b23898342 , _:b23898343 , _:b23898344 , _:b23898345 , _:b23898346 , _:b23898347 . _:b23898338 rdf:type ns1:Context ; rdf:value "Bladder cancer is one of the most lethal urological malignant tumors worldwide [>>1<<]. Urothelial carcinoma of the bladder (UCB) is the most common histological subtype of bladder cancer." ; ns1:mentions . _:b23898339 rdf:type ns1:Context ; rdf:value "Overall, 70% of bladder tumors present as noninvasive urothelial carcinoma (UC), and the remainder present as muscle-invasive disease [>>2<<]. To date, the best established and routinely used clinical markers to predict UCBs prognosis are pTNM stage and tumor differentiation [3]. However, the prognosis of UCB patients with disease of the same clinical stage often differs" ; ns1:mentions . _:b23898340 rdf:type ns1:Context ; rdf:value "To date, the best established and routinely used clinical markers to predict UCBs prognosis are pTNM stage and tumor differentiation [>>3<<]. However, the prognosis of UCB patients with disease of the same clinical stage often differs substantially even after surgical resection, and this large variation is mostly unexplained. Thus, a large amount of investigations on UCB have" ; ns1:mentions . _:b23898341 rdf:type ns1:Context ; rdf:value "Yes-associated protein 1 (YAP 1), a 65-kDa proline-rich phosphorprotein, is one of the transcription co-activator which is regulated by the Hippo tumor suppressor pathway [>>4<<-8]. YAP 1 was originally identified because of its interaction with the Src family tyrosine kinase Yes [9,10]." ; ns1:mentions , , , , . _:b23898342 rdf:type ns1:Context ; rdf:value "YAP 1 was originally identified because of its interaction with the Src family tyrosine kinase Yes [>>9<<,10]. Recently, YAP 1 has been suggested to be a candidate oncogene [11-13], and it was found to be elevated in several types of cancers including liver, colon, prostate, ovarian, and breast cancers [14-16]. In addition, it was reported" ; ns1:mentions . _:b23898343 rdf:type ns1:Context ; rdf:value "YAP 1 was originally identified because of its interaction with the Src family tyrosine kinase Yes [9,>>10<<]. Recently, YAP 1 has been suggested to be a candidate oncogene [11-13], and it was found to be elevated in several types of cancers including liver, colon, prostate, ovarian, and breast cancers [14-16]. In addition, it was reported that" ; ns1:mentions . _:b23898344 rdf:type ns1:Context ; rdf:value "Recently, YAP 1 has been suggested to be a candidate oncogene [>>11<<-13], and it was found to be elevated in several types of cancers including liver, colon, prostate, ovarian, and breast cancers [14-16]." ; ns1:mentions , , . _:b23898345 rdf:type ns1:Context ; rdf:value "Recently, YAP 1 has been suggested to be a candidate oncogene [11-13], and it was found to be elevated in several types of cancers including liver, colon, prostate, ovarian, and breast cancers [>>14<<-16]. In addition, it was reported that transgenic mice with liver-specific YAP 1 overexpression showed a dramatic increase in liver size and eventually developed tumors [17,18]. To date, however, abnormalities in YAP 1 and their" ; ns1:mentions , , . _:b23898346 rdf:type ns1:Context ; rdf:value "In addition, it was reported that transgenic mice with liver-specific YAP 1 overexpression showed a dramatic increase in liver size and eventually developed tumors [>>17<<,18]. To date, however, abnormalities in YAP 1 and their clinicopathologic/prognostic implication in UCBs have not been explored." ; ns1:mentions . _:b23898347 rdf:type ns1:Context ; rdf:value "In addition, it was reported that transgenic mice with liver-specific YAP 1 overexpression showed a dramatic increase in liver size and eventually developed tumors [17,>>18<<]. 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